06 October 2020>: Database Analysis
Creation of a Prognostic Risk Prediction Model for Lung Adenocarcinoma Based on Gene Expression, Methylation, and Clinical Characteristics
Honggang Ke 1CD* , Yunyu Wu 2DEF* , Runjie Wang 3CDF , Xiaohong Wu 4AB*DOI: 10.12659/MSM.925833
Med Sci Monit 2020; 26:e925833
Table 1 The gene expression profiling and methylation profiling datasets in this study.
GEO accession | Platform | Total probe number | Total sample | Normal sample | Cancer sample | |
---|---|---|---|---|---|---|
Gene expression | GSE75037 | GPL6884 Illumina | 48803 | 166 | 83 | 83 |
GSE33532 | GPL570 Affymetrix | 54675 | 60 | 40 | 20 | |
GSE43458 | GPL6244 Affymetrix | 33297 | 110 | 80 | 30 | |
GSE30219 | GPL570 Affymetrix | 54675 | 98 | 84 | 14 | |
GSE32863 | GPL6884 Illumina | 48803 | 116 | 58 | 58 | |
GSE10072 | GPL96 Affymetrix | 22283 | 107 | 58 | 49 | |
Gene methylation | GSE32861 | GPL8490 Illumina | 27578 | 118 | 59 | 59 |
GSE49996 | GPL8490 Illumina | 27578 | 88 | 44 | 44 | |
GSE63384 | GPL8490 Illumina | 27578 | 70 | 35 | 35 | |
GSE62948 | GPL8490 Illumina | 27578 | 56 | 28 | 28 | |
GEO – Gene Expression Omnibus. |