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14 December 2020: Database Analysis

Integrated Bioinformatics Analysis Reveals Key Candidate Genes and Cytokine Pathways Involved in COVID-19 After Rhinovirus Infection in Asthma Patients

Wenjuan Dai 1AC* , Dawei Cao 1BC* , Wei Zhang 1BF , Yangyang Wei 1BD , Daqing Ding 2D , Bei Li 2C , Yan Gao 2D , Lixuan Zhao 2C , Yi Jiang 1B , Xiaomei Kong 1AEG*

DOI: 10.12659/MSM.928861

Med Sci Monit 2020; 26:e928861

Table 1 415 DEGs in the intersection of FVA and FVC.

DEGsGenes
UpregulatedIRF7, MX2, CMPK2, TRIM25, OAS3, IFIT5, DDX60L, RSAD2, MX1, IFI16, ADAR, USP18, STAT1, PNPT1, TRIM14, OAS1, OAS2, XAF1, IFIT1, DHX58, DDX58, CMTR1, RTP4, PARP12, SP100, EPSTI1, IFIT2, PARP9, IFI35, HERC6, LAMP3, UBE2L6, SAMD9L, PLSCR1, HERC5, OASL, IFIT3, C19orf66, IFI44, TRANK1, SP110, HSH2D, DTX3L, ISG15, IFIH1, ZC3HAV1, PARP10, TRIM21, DDX60, PARP14, IFITM1, NMI, SLC25A28, ISG20, ETV7, STAT2, NLRC5, TRIM5, MYD88, TDRD7, SMCHD1, XRN1, TRIM22, PHF11, SAMD9, GTPBP2, RNF213, NT5C3A, LAP3, ZCCHC2, FAM46A, IFI44L, TREX1, SCO2, GTPBP1, PML, FBXO6, TOR1B, PLEKHA4, UBA7, AIM2, TNFSF10, TAP1, NUB1, GBP4, LMO2, MOV10, APOL6, TAPSAR1, GBP1, SCAMP1-AS1, STARD5, EIF2AK2, N4BP1, BST2, TYMP, IFITM3, IRF9, HELZ2, RNF19B, HLA-E, MOB3C, LGALS9, CNP, SPATS2L, ZNFX1, GMPR, OPTN, CXCL10, C5orf56, RBCK1, APOBEC3G, HDX, CSRNP1, SECTM1, PRKD2, PSMB8, FBXO39, TTC39B, PSMB9, WARS, IRF1, BATF2, TRIM38, LGALS17A, LY6E, IFI6, JAK2, CLEC7A, SAMHD1, SP140L, EXOC3L1, PI4K2B, NUPR1, SIDT1, PCGF5, IFNL3, CASP1, ACSL1, EHD4, CD68, TAP2, SLFN5, TLR3, LOC101927027, TRIB2, LIFR, GRIP2, ACE2, MASTL, BCL2L14, TRAFD1, PRICKLE4, APOL2, BCL3, GBP5, BTC, PIK3AP1, SLC15A3, NFE2L3, ZBP1, ZFYVE26, RASGRP3, TMEM140, ZC3H12A, KIAA1551, CTRL, MLKL, NFKBIA, LYSMD2, MAB21L2, GNB4, C17orf67, GBP1P1, DUOX2, PMAIP1, USP30-AS1, SOD2, CIITA, OGFR, LYPD5, APOBEC3A, IFNL1, AKAP7, ACKR4, TNFAIP3, RBMS2, HESX1, HTR2B, MXD1, IL4I1, BLZF1, DUOXA2, NCOA7, RBM11, HRASLS2, SUSD3, FGD2, CCL5, IFI27, TICAM1, CCDC109B, APOBEC3F, GCH1, IL22RA1, TNFSF13B, C19orf38, IKBKE, IFNL2, CASP10, LRRN2, PPM1K, CD7, APOL3, IRAK2, NFKBIZ, UBQLNL, C21orf91, IL7, HLA-F, CD38, RELB, GCNT4, RHBDF2, CX3CL1, CD83, TNFRSF6B, PPM1J, TAGAP, BTN3A3, TMEM229B, FFAR2, CARD16, SOCS1, STX11, OVOL1, IL19, BIRC3, GLRX, CPNE5, MAFF, CXorf49, CXorf49B, CEACAM1, SEC16B, PRDM1, ADCY4, ATF3, LINC00623, TLR2, IFITM2, NRG2, BBC3, SOCS3, KIAA0226, CXCL11, CXCL9, IL15RA, LAG3, STARD4, IDO1, SOCS2, ICOSLG, C1GALT1, FANCA, KCNQ4, NCF1, C10orf105, AP5B1, TMEM171, GBP2, HK2, BRIP1, RAB43, MUC13, IFI30, NCF1C, SP140, HAPLN3, ARID5A, SLC16A1, CD274, KLHDC7B, CACNA1A, CSF3, MAP2, CCL20, TMEM106A, SERPING1, TNFAIP2, CLCA3P, TNIP3, DLG2, CXCL8, MAPK8IP2, IL17C, PLAUR, NEURL3, PROX1, APOBEC3B, TNF, MB21D1, THEMIS2, FRMD3, HBEGF, BRCA2, DUXAP10, TMEM92, DUSP5, EXOC3L4, APOL4, C11orf82, RIMS2, C15orf48, C2CD4B, NOV, ADAM8, SLFN12, MICB, GBP3, GRIN3A, C1R, LOC102724163, SEMA3D, IL2RG, LOC645638, FGF2, FAM169B, LOC100294362, MT2A, ABCD1, ZNF618, LRRC3, SAA4, CYP21A1P, SLC26A4-AS1, SERPINB9, SERPINB9P1, BATF, LOC388692, TLDC2, IL36G, PRRX2, TGM1, ELOVL7, CXCL3, TNFRSF10A, RTKN2, CCL22, HDAC9, ATP10A, IL6, SBK1, BCL2A1, DOC2B, C2CD4A, C1S, ADM, HCG4B, PTPRH, HCAR3, PDCD1LG2, C8orf4, CXCL2, STS, RET, NOS2, SLC26A4, SLCO4A1, SELL, NTNG2, HLA-J, RND1, CFB, XDH, MMP13, TRIM31, SAA2, SPRR2A, PTGS2, MTNR1A, AKAP2, ACHE, DEFB4A, ICAM1, EREG, SPRR2F, CH25H, IL1RN, NEXN, CSF1, HSPA6, LOC554223, APOL1, SLAMF7, LIF, MEF2C, SSC5D, TGM2, ZDHHC14, CXCL13, ERAP2, ANGPTL4, SH2D1B, THSD1, PLA2G4E
DownregulatedC20orf195, FAM13C, HPX, INHBB, GPATCH11, PTGFR, PRR18, SLC16A14, SLC47A2

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Medical Science Monitor eISSN: 1643-3750
Medical Science Monitor eISSN: 1643-3750