13 June 2020>: Database Analysis
Comprehensive Analysis of Competing Endogenous RNA (ceRNA) Network Based on RNAs Differentially Expressed in Lung Adenocarcinoma Using The Cancer Genome Atlas (TCGA) Database
Huaihui Tang 1ABCDEF , Zhongshuai Wang 2F , Qianqian Shao 3F , Yue Wang 1FG , Qingshan Yang 1AEG*DOI: 10.12659/MSM.922676
Med Sci Monit 2020; 26:e922676
Table 2 KEGG pathway analysis of mRNAs in the ceRNA network.
Category | Term | Count | P-value | Genes |
---|---|---|---|---|
KEGG_PATHWAY | hsa04110: Cell cycle | 11 | 8.30E-05 | CCNB1, CCNE2, CDK1, E2F2, CDC6, MAD2L1, BUB1, TTK, CHEK1, CCNA2, CDC25A |
KEGG_PATHWAY | hsa04512: ECM-receptor interaction | 9 | 1.76E-04 | IBSP, ITGA8, COL3A1, COL1A1, THBS2, COL5A2, COL5A1, THBS4, HMMR |
KEGG_PATHWAY | hsa04974: Protein digestion and absorption | 8 | 0.001086713 | COL9A1, COL3A1, MME, COL1A1, ATP1A2, SLC1A1, COL5A2, COL5A1 |
KEGG_PATHWAY | hsa04950: Maturity onset diabetes of the young | 5 | 0.001173894 | HNF4A, ONECUT1, NEUROD1, HNF4G, NKX2-2 |
KEGG_PATHWAY | hsa04151: PI3K-Akt signaling pathway | 14 | 0.01022117 | IBSP, FGF5, EFNA3, COL3A1, IL7R, COL5A2, COL5A1, CCNE2, G6PC, ITGA8, COL1A1, THBS2, PPP2R2C, THBS4 |
KEGG_PATHWAY | hsa04914: Progesterone-mediated oocyte maturation | 6 | 0.021316139 | CCNB1, CDK1, MAD2L1, BUB1, CCNA2, CDC25A |
KEGG_PATHWAY | hsa05202: Transcriptional misregulation in cancer | 8 | 0.033242245 | ERG, HOXA10, NR4A3, HMGA2, IGFBP3, PLAU, TLX1, MYCN |
KEGG_PATHWAY | hsa04115: p53 signaling pathway | 5 | 0.033931086 | CCNB1, CCNE2, CDK1, CHEK1, IGFBP3 |
KEGG_PATHWAY | hsa04510: Focal adhesion | 9 | 0.034922922 | IBSP, RASGRF1, ITGA8, COL3A1, COL1A1, THBS2, COL5A2, COL5A1, THBS4 |
KEGG_PATHWAY | hsa04976: Bile secretion | 5 | 0.037228947 | SLCO1B3, LDLR, ABCC2, ATP1A2, ABCG2 |
KEGG – Kyoto Encyclopedia of Genes and Genomes; mRNAs – messenger RNAs; ceRNAs – competing endogenous RNAs. -value |