29 January 2021 : Database Analysis
Construction and Evaluation of a Risk Score Model for Autophagy-Related Genes in Esophageal Adenocarcinoma
Tianfu Xu1ABCDEF, Yamei Yuan2EFG*, Chenggong He3D, Kun Yang3DDOI: 10.12659/MSM.927850
Med Sci Monit 2021; 27:e927850
Table 3 Results of Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses.
| A: Enrichment in phenotype: High. | |||
|---|---|---|---|
| Gene set name | NES | NOM P val | FDR q val |
| KEGG_PROTEIN_EXPORT | 1.58 | 0.041 | 1.000 |
| KEGG_RIBOFLAVIN_METABOLISM | 1.57 | 0.022 | 1.000 |
| KEGG_TGF_BETA_SIGNALING_PATHWAY | 1.53 | 0.039 | 1.000 |
| NES – normalized enrichment score; NOM – nominal; FDR – false discovery rate. | |||
| B: Enrichment in phenotype: Low. | |||
| Gene set name | NES | NOM P val | FDR q val |
| KEGG_RIBOSOME | −1.82 | 0.006 | 0.397 |
| KEGG_GLYCOLYSIS_GLUCONEOGENESIS | −1.59 | 0.023 | 1.000 |
| KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM | −1.56 | 0.043 | 0.974 |
| KEGG_ARACHIDONIC_ACID_METABOLISM | −1.56 | 0.023 | 0.745 |
| KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450 | −1.54 | 0.044 | 0.672 |
| KEGG_PHENYLALANINE_METABOLISM | −1.49 | 0.044 | 0.758 |
| NES – normalized enrichment score; NOM – nominal; FDR – false discovery rate. | |||