26 August 2023 : Database Analysis
An Immune-Related Gene Signature for Predicting Survival and Immunotherapy Efficacy in Esophageal Adenocarcinoma
Chuang Yang1BC, Feng Cao2EF, Yan He2A*DOI: 10.12659/MSM.940157
Med Sci Monit 2023; 29:e940157
Supplementary Table 4 The results of TIDE, dysfunction and exclusion scores.
| Patient | TIDE | MSI Expr Sig | Dysfunction | Exclusion |
|---|---|---|---|---|
| TCGA-IG-A7DP-01A-31R-A336-31 | 0.35 | 0 | 0.35 | 0.56 |
| TCGA-L5-A8NU-01A-11R-A36D-31 | 0.16 | 0 | 0.16 | 0.39 |
| TCGA-L5-A4OO-01A-11R-A260-31 | 0.08 | 0 | 0.08 | 1 |
| TCGA-L5-A4OQ-11A-12R-A260-31 | 0.08 | 0 | 0.08 | 1.58 |
| TCGA-L5-A4OO-11A-12R-A260-31 | 0.07 | nan | 0.07 | 0.34 |
| TCGA-L5-A4OR-11A-11R-A260-31 | 0.06 | nan | 0.06 | 0.01 |
| TCGA-L5-A4OG-11A-12R-A260-31 | 0.06 | nan | 0.06 | 0.06 |
| TCGA-L5-A4OJ-11A-12R-A260-31 | 0.06 | nan | 0.06 | 0.07 |
| TCGA-IC-A6RE-11A-12R-A336-31 | 0.06 | nan | 0.06 | 0.02 |
| TCGA-L5-A88T-01A-11R-A354-31 | 0.05 | nan | 0.05 | 0.13 |
| TCGA-JY-A939-01A-12R-A37I-31 | 0.05 | 0 | 0.05 | 0.03 |
| TCGA-L5-A88Y-01A-11R-A354-31 | 0.04 | 0 | 0.04 | 0.59 |
| TCGA-2H-A9GK-01A-11R-A37I-31 | 0.04 | 0 | 0.04 | 0.46 |
| TCGA-R6-A6Y0-01B-11R-A336-31 | 0.03 | nan | 0.03 | 0.1 |
| TCGA-VR-A8EQ-01A-11R-A36D-31 | 0.03 | 1 | 0.03 | 0.36 |
| TCGA-L5-A893-01A-11R-A36D-31 | 0.02 | nan | 0.02 | 0.26 |
| TCGA-JY-A93D-01A-11R-A38D-31 | −0.01 | 0 | −0.01 | 1.38 |
| TCGA-L5-A4OF-11A-12R-A260-31 | −0.02 | nan | −0.02 | 0.16 |
| TCGA-JY-A93E-01A-11R-A37I-31 | −0.02 | 0 | −0.02 | 0.98 |
| TCGA-V5-A7RE-11A-11R-A354-31 | −0.02 | 0 | −0.02 | 0.03 |
| TCGA-L5-A4OU-01A-11R-A28J-31 | −0.02 | 0 | −0.02 | 0.56 |
| TCGA-L5-A4OE-01A-11R-A260-31 | −0.03 | 1 | −0.03 | 0.31 |
| TCGA-L5-A8NV-01A-11R-A37I-31 | −0.05 | 0 | −0.05 | 0.41 |
| TCGA-L5-A8NW-01A-11R-A37I-31 | −0.05 | 0 | −0.05 | 0.43 |
| TCGA-V5-AASW-01A-11R-A406-31 | −0.06 | 0 | −0.06 | 0.17 |
| TCGA-L5-A8NE-01A-11R-A37I-31 | −0.07 | 1 | −0.07 | −0.05 |
| TCGA-L5-A8NT-01A-11R-A37I-31 | −0.08 | 0 | −0.08 | 1.74 |
| TCGA-Q9-A6FW-01A-31R-A31P-31 | −0.08 | 1 | −0.08 | 0.33 |
| TCGA-L5-A8NJ-01A-11R-A36D-31 | −0.09 | 0 | −0.09 | 0.44 |
| TCGA-R6-A8W8-01B-11R-A37I-31 | −0.1 | 0 | −0.1 | 0.3 |
| TCGA-V5-AASX-01A-11R-A38D-31 | −0.1 | 0 | −0.1 | 0.53 |
| TCGA-2H-A9GR-01A-12R-A37I-31 | −0.1 | 0 | −0.1 | 0.72 |
| TCGA-L5-A88V-01A-11R-A354-31 | −0.12 | 0 | −0.12 | 0.6 |
| TCGA-JY-A6FB-01A-11R-A336-31 | −0.12 | 0 | −0.12 | 0.54 |
| TCGA-L5-A8NR-01A-11R-A37I-31 | −0.12 | 0 | −0.12 | 0.78 |
| TCGA-L5-A8NL-01A-12R-A37I-31 | −0.13 | 0 | −0.13 | 1.9 |
| TCGA-2H-A9GI-01A-11R-A37I-31 | −0.13 | 0 | −0.13 | 0.22 |
| TCGA-L5-A8NG-01A-11R-A37I-31 | −0.13 | 0 | −0.13 | 0.88 |
| TCGA-2H-A9GF-01A-11R-A37I-31 | −0.13 | 0 | −0.13 | 0.85 |
| TCGA-ZR-A9CJ-01B-11R-A38D-31 | −0.14 | 0 | −0.14 | 1.77 |
| TCGA-M9-A5M8-01A-11R-A28J-31 | −0.15 | 0 | −0.15 | 0.54 |
| TCGA-L5-A4OP-01A-11R-A260-31 | −0.16 | 0 | −0.16 | 0.37 |
| TCGA-R6-A6L4-01A-11R-A31P-31 | −0.16 | 0 | −0.16 | 0.15 |
| TCGA-L7-A6VZ-01A-12R-A336-31 | −0.16 | 0 | −0.16 | 0.53 |
| TCGA-2H-A9GG-01A-11R-A37I-31 | −0.17 | 0 | −0.17 | 0.66 |
| TCGA-IC-A6RE-01A-11R-A336-31 | −0.17 | 0 | −0.17 | 0.78 |
| TCGA-L5-A43E-01A-11R-A24K-31 | −0.17 | 0 | −0.17 | 0.13 |
| TCGA-S8-A6BV-01A-21R-A31P-31 | −0.17 | 0 | −0.17 | 0.6 |
| TCGA-L5-A4OW-01A-11R-A28J-31 | −0.17 | 0 | −0.17 | 0.73 |
| TCGA-L5-A4OS-01A-11R-A28J-31 | −0.18 | 0 | −0.18 | 1.28 |
| TCGA-L5-A4OJ-01A-11R-A260-31 | −0.18 | nan | −0.18 | 0.46 |
| TCGA-L5-A4OI-01A-11R-A36D-31 | −0.18 | nan | −0.18 | 0.44 |
| TCGA-L5-A8NS-01A-12R-A37I-31 | −0.18 | 0 | −0.18 | 1.38 |
| TCGA-L5-A8NF-01A-11R-A37I-31 | −0.18 | 0 | −0.18 | 0.14 |
| TCGA-RE-A7BO-01A-11R-A336-31 | −0.19 | nan | −0.19 | 0.73 |
| TCGA-L5-A4OG-01A-11R-A260-31 | −0.19 | 0 | −0.19 | 0.54 |
| TCGA-L5-A4OX-01A-21R-A28J-31 | −0.2 | 0 | −0.2 | 0.38 |
| TCGA-L5-A4ON-01A-11R-A260-31 | −0.2 | 0 | −0.2 | 0.28 |
| TCGA-V5-A7RB-01A-11R-A354-31 | −0.2 | 0 | −0.2 | 0.59 |
| TCGA-2H-A9GJ-01A-11R-A37I-31 | −0.21 | 0 | −0.21 | 0.42 |
| TCGA-2H-A9GM-01A-11R-A37I-31 | −0.21 | 0 | −0.21 | 0.65 |
| TCGA-L5-A4OT-01A-11R-A28J-31 | −0.21 | 0 | −0.21 | 1.05 |
| TCGA-L5-A8NH-01A-11R-A37I-31 | −0.21 | 0 | −0.21 | 0.38 |
| TCGA-JY-A93C-01A-11R-A38D-31 | −0.22 | 0 | −0.22 | 0.83 |
| TCGA-L5-A8NM-01A-11R-A37I-31 | −0.22 | nan | −0.22 | 0.67 |
| TCGA-R6-A8W5-01B-11R-A37I-31 | −0.23 | 0 | −0.23 | 1.01 |
| TCGA-R6-A8WC-01A-11R-A37I-31 | −0.23 | 0 | −0.23 | 0.53 |
| TCGA-R6-A8WG-01A-11R-A37I-31 | −0.23 | 0 | −0.23 | 1.15 |
| TCGA-V5-A7RE-01A-11R-A354-31 | −0.24 | 0 | −0.24 | 0.48 |
| TCGA-IG-A4QS-01A-11R-A260-31 | −0.24 | 0 | −0.24 | 0.35 |
| TCGA-V5-AASX-11A-11R-A38D-31 | −0.24 | nan | −0.24 | 0.4 |
| TCGA-L5-A891-01A-11R-A36D-31 | −0.24 | 0 | −0.24 | 1.01 |
| TCGA-L5-A4OH-01A-11R-A260-31 | −0.27 | 0 | −0.27 | 0.54 |
| TCGA-JY-A6FH-01A-11R-A336-31 | −0.28 | 0 | −0.28 | 0.7 |
| TCGA-R6-A6XQ-01B-11R-A336-31 | −0.29 | 0 | −0.29 | 0.64 |
| TCGA-L5-A8NN-01A-11R-A37I-31 | −0.32 | 0 | −0.32 | 0.8 |
| TCGA-R6-A6DQ-01B-11R-A31P-31 | −0.32 | 0 | −0.32 | 0.63 |
| TCGA-VR-AA4D-01A-11R-A37I-31 | −0.34 | 0 | −0.34 | 0.54 |
| TCGA-2H-A9GO-01A-11R-A37I-31 | −0.36 | 0 | −0.36 | 0.43 |
| TCGA-L5-A8NI-01A-11R-A37I-31 | −0.37 | 0 | −0.37 | 1.71 |
| TCGA-2H-A9GH-01A-11R-A37I-31 | −0.38 | 0 | −0.38 | 0.78 |
| TCGA-R6-A6DN-01B-11R-A31P-31 | −0.38 | 0 | −0.38 | 0.93 |
| TCGA-R6-A6XG-01B-11R-A336-31 | −0.39 | 0 | −0.39 | 0.55 |
| TCGA-2H-A9GN-01A-11R-A37I-31 | −0.39 | 0 | −0.39 | 1.21 |
| TCGA-2H-A9GL-01A-12R-A37I-31 | −0.42 | 0 | −0.42 | 1.08 |
| TCGA-R6-A6KZ-01A-11R-A31P-31 | −0.44 | 0 | −0.44 | 1.56 |
| TCGA-2H-A9GQ-01A-11R-A37I-31 | −0.69 | 0 | −0.69 | 1.38 |